Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945662.1_cds_XP_016488097.1_78765
CDS Infomation

[gene=LOC107808121] [db_xref=GeneID:107808121] [protein=carbon catabolite repressor protein 4 homolog 5 isoform X4] [protein_id=XP_016488097.1] [location=join(29550..29961,30087..30250,30665..30730,30832..30884,31111..31192,31838..31884,32023..32104,33029..33121,33204..33236,33344..33420,33578..33683,35509..35577)] [gbkey=CDS]
Sequence

ATGCATCTTTCACGTTTCACATATTCGTCCGATAAAGGGTTAAGTACGCCGTACGCGCCG
CCAAAATTCAAATCTCCCGGCAACATGGGCCGAATCGGCGACGGAAGATACCCACCGGCG
GAGCAACCTTCTCGGTCTTCCGCTTCAAAGAGAAGTAGAACTAGTCAATTCGACGTCGGT
CAACACCGTAGCAAAAAGAAGCAAAGAGGAACAATACGTCAAACTGAGACTGAAACTGAA
ACCCTAACCCTGAATCATACTTCCACTTCTTATACCCGTACATATGCAACTTCCTCCACT
TTTTCGTACAATAGGCGCAAAGAAAAACGGCATAAAGGAAAATCAAAGAGGACGAGTGCA
GAGGATAAGCGCAAGTGGGTTTATTCTACTCACGATGTTTCCCCATATCTAGATAGAGTT
GTTTTTATGTCGTATAATATACTAGGGGTAAAAAATGCAGCTAACCATGAGGATCTATAC
AACAATGTTGCTCCAAAGTATTTGGATTGGGACTACCGCAAGCGGCTTATTCGCAAGGAA
ATTAGAGAATATAATCCGGGTATAATGTGTTTCCAGGAGGTTGATTGTTATGATGATTTA
GATTATCTCCTCCAGAAAGAGGGCTTCAAAGGGGTTTATCAGGCTCGTACAGGTGATGCA
TGTGATGGTTGTGCGATATTTTGGAACAGAGAACTATTTGACCTTCTGCACGAGGAGAGC
ATAGAATTCCAGGAGTTTGATCTACGCAATAATGTTTGCCAACTTTGTGTTTTCAAGATG
AACGTGAAGAACTCAAGTAAGGATATGGGTGCTTCAAATTCGGAGAGTATATCATCACGA
AGCTTTGTGGTTGGCAATATTCATGTACTCTTCAACCCCAACCGTGGAGACATTAAGTTG
GGGCAGGTTAGACTGTTTCTTGAGAGTGCCCAAAGGCTATCACTAGAATGGGGTGATATA
CCAGTTGTGCTTGCTGGAGATCTTAATAGTATGCCCCAGAGTGCAATGTATCAGTTTTTG
ACTTCAAGTAAGTTGGACATCCAAATGCATGAACGGAAGCAAATTTCTGGCCAAATATAT
CCATTGCAAAATAGAAGCTTCAAGTCAAGCTTTATTTATAGATGGAGTGATGAGGAGCTA
AGGCTTGCTACCGGGACAGGAGCTAGTCACCTGATACATCAATTACAGCTGCGCAGTGCC
TATGCTGGAGTTCCTAAATGGGGAAGTGATCATCTTGCTCTAGTTTGCGAGCTGGCTTTT
ACTGATGGAGGCAGTGAGACTTGA

Peptide Sequence

PEP ID

XP_016488097.1
PEP Infomation

PREDICTED: carbon catabolite repressor protein 4 homolog 5 isoform X4 [Nicotiana tabacum]
Sequence

MHLSRFTYSSDKGLSTPYAPPKFKSPGNMGRIGDGRYPPAEQPSRSSASKRSRTSQFDVG
QHRSKKKQRGTIRQTETETETLTLNHTSTSYTRTYATSSTFSYNRRKEKRHKGKSKRTSA
EDKRKWVYSTHDVSPYLDRVVFMSYNILGVKNAANHEDLYNNVAPKYLDWDYRKRLIRKE
IREYNPGIMCFQEVDCYDDLDYLLQKEGFKGVYQARTGDACDGCAIFWNRELFDLLHEES
IEFQEFDLRNNVCQLCVFKMNVKNSSKDMGASNSESISSRSFVVGNIHVLFNPNRGDIKL
GQVRLFLESAQRLSLEWGDIPVVLAGDLNSMPQSAMYQFLTSSKLDIQMHERKQISGQIY
PLQNRSFKSSFIYRWSDEELRLATGTGASHLIHQLQLRSAYAGVPKWGSDHLALVCELAF
TDGGSET

Transcript Sequence

Gene sequence data has not been registered.